Package fr.ens.biologie.genomique.aozan.aozan3

Class RunDataFactory

java.lang.Object

fr.ens.biologie.genomique.aozan.aozan3.RunDataFactory

public class RunDataFactory
extends Object

This class define a RunData factory

Since:

3.0

Author:

Laurent Jourdren

Method Summary

Modifier and Type	Method	Description
static RunData	newPartialProcessedIlluminaRunData(DataStorage storage, Path path, SequencerSource source)	Create a new Illumina partial processed run data.
static RunData	newPartialRawIlluminaRunData(DataStorage storage, Path path, SequencerSource source)	Create a new partial Illumina run data.
static RunData	newProcessedIlluminaRunData(DataStorage storage, Path path, SequencerSource source)	Create a new Illumina processed run data.
static RunData	newRawIlluminaRunData(DataStorage storage, Path path, SequencerSource source)	Create a new Illumina run data.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

newRawIlluminaRunData

public static RunData newRawIlluminaRunData(DataStorage storage,
                                            Path path,
                                            SequencerSource source)

Create a new Illumina run data.

Parameters:

storage - the storage used for the data

path - path of the data

source - source of the data

Returns:

a new RunData object

newPartialRawIlluminaRunData

public static RunData newPartialRawIlluminaRunData(DataStorage storage,
                                                   Path path,
                                                   SequencerSource source)

Create a new partial Illumina run data.

Parameters:

storage - the storage used for the data

path - path of the data

source - source of the data

Returns:

a new RunData object

newProcessedIlluminaRunData

public static RunData newProcessedIlluminaRunData(DataStorage storage,
                                                  Path path,
                                                  SequencerSource source)

Create a new Illumina processed run data.

Parameters:

storage - the storage used for the data

path - path of the data

source - source of the data

Returns:

a new RunData object

newPartialProcessedIlluminaRunData

public static RunData newPartialProcessedIlluminaRunData(DataStorage storage,
                                                         Path path,
                                                         SequencerSource source)

Create a new Illumina partial processed run data.

Parameters:

storage - the storage used for the data

path - path of the data

source - source of the data

Returns:

a new RunData object