NonIndexedBaseCountGlobalTest (Aozan 3.1 API)

java.lang.Object
- fr.ens.biologie.genomique.aozan.tests.global.AbstractGlobalTest
- - fr.ens.biologie.genomique.aozan.tests.global.AbstractSimpleGlobalTest
  - - fr.ens.biologie.genomique.aozan.tests.global.NonIndexedBaseCountGlobalTest

All Implemented Interfaces:

AozanTest, GlobalTest
```
public class NonIndexedBaseCountGlobalTest
extends AbstractSimpleGlobalTest
```
This class define a non indexed base count global test.

Since:

1.3

Author:

Laurent Jourdren

Constructor Summary

Constructors
Constructor Description

NonIndexedBaseCountGlobalTest()
Public constructor.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`List<String>`	`getCollectorsNamesRequiered()`	Get the name of the collectors required for the test.
`protected String`	`getKey()`	Get the the key in the RunData object for the value to test.
`protected Class<?>`	`getValueType()`	Get the type of the value.
`protected Number`	`transformValue(Number value, RunData data)`	Transform the value.

Methods inherited from class fr.ens.biologie.genomique.aozan.tests.global.AbstractSimpleGlobalTest
configure, isValuePercent, test

Methods inherited from class fr.ens.biologie.genomique.aozan.tests.global.AbstractGlobalTest
getColumnName, getDescription, getName, getUnit, init

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - NonIndexedBaseCountGlobalTest
```
public NonIndexedBaseCountGlobalTest()
```
    Public constructor.
- Method Detail
  - getCollectorsNamesRequiered
```
public List<String> getCollectorsNamesRequiered()
```
    Description copied from interface: AozanTest
    
    Get the name of the collectors required for the test.
    
    Returns:
    
    a list of String with the name of the required collectors
  - getKey
```
protected String getKey()
```
    Description copied from class: AbstractSimpleGlobalTest
    
    Get the the key in the RunData object for the value to test.
    
    Specified by:
    
    getKey in class AbstractSimpleGlobalTest
    
    Returns:
    
    a String with the required key
  - getValueType
```
protected Class<?> getValueType()
```
    Description copied from class: AbstractSimpleGlobalTest
    
    Get the type of the value.
    
    Specified by:
    
    getValueType in class AbstractSimpleGlobalTest
    
    Returns:
    
    a Class object with the type
  - transformValue
```
protected Number transformValue(Number value,
                                RunData data)
```
    Description copied from class: AbstractSimpleGlobalTest
    
    Transform the value.
    
    Overrides:
    
    transformValue in class AbstractSimpleGlobalTest
    
    Parameters:
    
    value - value to transform
    
    data - run data
    
    Returns:
    
    the transformed value