Uses of Package
fr.ens.biologie.genomique.aozan.collectors
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Packages that use fr.ens.biologie.genomique.aozan.collectors Package Description fr.ens.biologie.genomique.aozan Root package of Aozan.fr.ens.biologie.genomique.aozan.collectors This package defines the collectors which collects data for a run.fr.ens.biologie.genomique.aozan.collectors.interop This package defines the collectors which collects data from InterOp binary files for a run.fr.ens.biologie.genomique.aozan.collectors.stats This package defines the statistics collectors which collects data for a run.fr.ens.biologie.genomique.aozan.fastqc This package contains a QCModule for FastQC that list the bad tiles in a fastq file and class used for modify fastqc bytecode, it is necessary with FastQC version 0.10.1.fr.ens.biologie.genomique.aozan.fastqscreen This package contains a module fastqscreen for the contamination detection in each sample of a run. -
Classes in fr.ens.biologie.genomique.aozan.collectors used by fr.ens.biologie.genomique.aozan Class Description Collector This interface define a Collector. -
Classes in fr.ens.biologie.genomique.aozan.collectors used by fr.ens.biologie.genomique.aozan.collectors Class Description AbstractFastqCollector The abstract class define commons methods for the Collectors which treats fastq files.Collector This interface define a Collector.CollectorConfiguration This class define the configuration of a collector.DemultiplexingCollector -
Classes in fr.ens.biologie.genomique.aozan.collectors used by fr.ens.biologie.genomique.aozan.collectors.interop Class Description Collector This interface define a Collector. -
Classes in fr.ens.biologie.genomique.aozan.collectors used by fr.ens.biologie.genomique.aozan.collectors.stats Class Description Collector This interface define a Collector.StatisticsCollector The class define a abstract statistics collector. -
Classes in fr.ens.biologie.genomique.aozan.collectors used by fr.ens.biologie.genomique.aozan.fastqc Class Description CollectorConfiguration This class define the configuration of a collector. -
Classes in fr.ens.biologie.genomique.aozan.collectors used by fr.ens.biologie.genomique.aozan.fastqscreen Class Description CollectorConfiguration This class define the configuration of a collector.