Package fr.ens.biologie.genomique.aozan.tests.global

Class Q30PercentGlobalTest

java.lang.Object

fr.ens.biologie.genomique.aozan.tests.global.AbstractGlobalTest

fr.ens.biologie.genomique.aozan.tests.global.Q30PercentGlobalTest

All Implemented Interfaces:

AozanTest, GlobalTest

public class Q30PercentGlobalTest
extends AbstractGlobalTest

This class define a Q30 percent global test.

Since:

2.0

Author:

Cyril Firmo

Constructor Summary

Constructors

Constructor	Description
Q30PercentGlobalTest()	Public constructor.

Method Summary

Modifier and Type	Method	Description
List<AozanTest>	configure(TestConfiguration conf)	Configure the test.
List<String>	getCollectorsNamesRequiered()	Get the name of the collectors required for the test.
TestResult	test(RunData data)	Do a test.

Methods inherited from class fr.ens.biologie.genomique.aozan.tests.global.AbstractGlobalTest

getColumnName, getDescription, getName, getUnit, init

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Q30PercentGlobalTest

public Q30PercentGlobalTest()

Public constructor.

Method Detail

configure

public List<AozanTest> configure(TestConfiguration conf)
                          throws AozanException

Description copied from interface: AozanTest

Configure the test.

Parameters:

conf - the test configuration

Returns:

list of Aozan tests

Throws:

AozanException

getCollectorsNamesRequiered

public List<String> getCollectorsNamesRequiered()

Description copied from interface: AozanTest

Get the name of the collectors required for the test.

Returns:

a list of String with the name of the required collectors

test

public TestResult test(RunData data)

Description copied from interface: GlobalTest

Do a test.

Parameters:

data - result object

Returns:

a TestResult object with the result of the test