Uses of Class
fr.ens.biologie.genomique.aozan.tests.TestResult
-
Packages that use TestResult Package Description fr.ens.biologie.genomique.aozan.tests.global This package contains class of global tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.tests.lane This package contains class of lane tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.tests.pooledsample This package contains class of project tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.tests.project This package contains class of project tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.tests.sample This package contains class of sample tests which defines the collector to launch and creates a report of a quality control. -
-
Uses of TestResult in fr.ens.biologie.genomique.aozan.tests.global
Methods in fr.ens.biologie.genomique.aozan.tests.global that return TestResult Modifier and Type Method Description TestResult
AbstractSimpleGlobalTest. test(RunData data)
TestResult
ClusterDensityGlobalTest. test(RunData data)
TestResult
ClusterDensityPFGlobalTest. test(RunData data)
TestResult
ErrorRateGlobalTest. test(RunData data)
TestResult
GlobalTest. test(RunData data)
Do a test.TestResult
OccupancyPercentGlobalTest. test(RunData data)
TestResult
ProjectCountGlobalTest. test(RunData data)
TestResult
Q30PercentGlobalTest. test(RunData data)
TestResult
SampleCountGlobalTest. test(RunData data)
TestResult
UndeterminedClusterPercentGlobalTest. test(RunData data)
-
Uses of TestResult in fr.ens.biologie.genomique.aozan.tests.lane
Methods in fr.ens.biologie.genomique.aozan.tests.lane that return TestResult Modifier and Type Method Description TestResult
AbstractSimpleLaneTest. test(RunData data, int read, boolean indexedRead, int lane)
TestResult
LaneTest. test(RunData data, int read, boolean indexedRead, int lane)
Do a test.TestResult
PFClusterPercentLaneTest. test(RunData data, int read, boolean indexedRead, int lane)
TestResult
PhasingPrephasingPercentLaneTest. test(RunData data, int read, boolean indexedRead, int lane)
TestResult
PhiXAlignPercentLaneTest. test(RunData data, int read, boolean indexedRead, int lane)
TestResult
PhiXRawClusterCountLaneTest. test(RunData data, int read, boolean indexedRead, int lane)
TestResult
Q30PercentLaneTest. test(RunData data, int read, boolean indexedRead, int lane)
-
Uses of TestResult in fr.ens.biologie.genomique.aozan.tests.pooledsample
Methods in fr.ens.biologie.genomique.aozan.tests.pooledsample that return TestResult Modifier and Type Method Description TestResult
AbstractSimpleSampleTest. test(RunData data, int pooledSampleId)
TestResult
FastQScreenMappedExceptRefPercentPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
FastQScreenMappedPercentPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
FastQScreenReportPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
FastQScreenSampleOvercontaminationCountPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
InProjectPercentPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
InRunPercentPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
PFBaseMeanQualityScorePooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
PFPercentPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
PooledSampleTest. test(RunData data, int pooledSampleId)
Do a test.TestResult
Q30PercentPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
RecoverablePFClusterPercentPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
RecoverableRawClusterPercentPooledSampleTest. test(RunData data, int pooledSampleId)
TestResult
SampleInPoolCountPooledSampleTest. test(RunData data, int pooledSampleId)
-
Uses of TestResult in fr.ens.biologie.genomique.aozan.tests.project
Methods in fr.ens.biologie.genomique.aozan.tests.project that return TestResult Modifier and Type Method Description TestResult
AbstractSimpleProjectTest. test(RunData data, int projectId)
TestResult
FastQScreenReportProjectTest. test(RunData data, int projectId)
TestResult
MultiQCReportProjectTest. test(RunData data, int projectId)
TestResult
ProjectTest. test(RunData data, int projectId)
Do a test.TestResult
RecoverablePFClusterPercentProjectTest. test(RunData data, int projectId)
TestResult
RecoverableRawClusterPercentProjectTest. test(RunData data, int projectId)
-
Uses of TestResult in fr.ens.biologie.genomique.aozan.tests.sample
Methods in fr.ens.biologie.genomique.aozan.tests.sample that return TestResult Modifier and Type Method Description TestResult
AbstractFastQCSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
AbstractSimpleSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
BasePFMeanQualityScoreSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
ClusterRecoveryReportSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
FastQScreenReportSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
InLanePercentSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
PFPercentSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
Q30PercentSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
RecoverablePFClusterPercentSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
RecoverableRawClusterPercentSampleTest. test(RunData data, int read, int readSample, int sampleId)
TestResult
SampleTest. test(RunData data, int read, int readSample, int sampleId)
Do a test.
-